Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPL13AP40429 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RPL13AP40429 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPL13AP40429 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.88□□□□□ -0.19
RPL13AP40429 AC020916.1-201ENST00000587762 1774 ntBASIC13.88□□□□□ -0.19
RPL13AP40429 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 TNXA-203ENST00000507684 2038 ntBASIC13.88□□□□□ -0.19
RPL13AP40429 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPL13AP40429 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPL13AP40429 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.88□□□□□ -0.19
RPL13AP40429 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPL13AP40429 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPL13AP40429 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPL13AP40429 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.87□□□□□ -0.19
RPL13AP40429 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RPL13AP40429 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 AC021242.3-201ENST00000607598 1377 ntBASIC13.87□□□□□ -0.19
RPL13AP40429 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RPL13AP40429 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.87□□□□□ -0.19
RPL13AP40429 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
RPL13AP40429 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPL13AP40429 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.87□□□□□ -0.19
RPL13AP40429 AC112907.3-201ENST00000577781 2400 ntBASIC13.86□□□□□ -0.19
RPL13AP40429 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL13AP40429 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.86□□□□□ -0.19
RPL13AP40429 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPL13AP40429 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL13AP40429 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL13AP40429 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.86□□□□□ -0.19
RPL13AP40429 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.86□□□□□ -0.19
RPL13AP40429 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RPL13AP40429 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.86□□□□□ -0.19
RPL13AP40429 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 MIR600HG-201ENST00000449175 5984 ntBASIC13.86□□□□□ -0.19
RPL13AP40429 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPL13AP40429 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPL13AP40429 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
RPL13AP40429 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPL13AP40429 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms