Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 COG8YML071C 1824 nt2.06□□□□□ -2.08
RRP8P38961 DNF3YMR162C 4971 nt2.06□□□□□ -2.08
RRP8P38961 snR72snR72 98 nt2.06□□□□□ -2.08
RRP8P38961 INA22YIR024C 651 nt2.06□□□□□ -2.08
RRP8P38961 PCC1YKR095W-A 267 nt2.06□□□□□ -2.08
RRP8P38961 RLM1YPL089C 2031 nt2.06□□□□□ -2.08
RRP8P38961 MSC6YOR354C 2079 nt2.06□□□□□ -2.08
RRP8P38961 SAC3YDR159W 3906 nt2.06□□□□□ -2.08
RRP8P38961 GCN2YDR283C 4980 nt2.05□□□□□ -2.08
RRP8P38961 YDR003W-AYDR003W-A 123 nt2.05□□□□□ -2.08
RRP8P38961 YGL188C-AYGL188C-A 141 nt2.05□□□□□ -2.08
RRP8P38961 JLP2YMR132C 627 nt2.05□□□□□ -2.08
RRP8P38961 YBR064WYBR064W 429 nt2.05□□□□□ -2.08
RRP8P38961 MPT5YGL178W 2580 nt2.05□□□□□ -2.08
RRP8P38961 LYS14YDR034C 2373 nt2.05□□□□□ -2.08
RRP8P38961 YDL211CYDL211C 1119 nt2.04□□□□□ -2.08
RRP8P38961 SPG3YDR504C 384 nt2.04□□□□□ -2.08
RRP8P38961 YOR015WYOR015W 360 nt2.04□□□□□ -2.08
RRP8P38961 AGC1YPR021C 2709 nt2.04□□□□□ -2.08
RRP8P38961 RFX1YLR176C 2436 nt2.03□□□□□ -2.08
RRP8P38961 YHL042WYHL042W 453 nt2.03□□□□□ -2.08
RRP8P38961 RPB10YOR210W 213 nt2.03□□□□□ -2.08
RRP8P38961 MUK1YPL070W 1839 nt2.03□□□□□ -2.09
RRP8P38961 SCW11YGL028C 1629 nt2.02□□□□□ -2.09
RRP8P38961 UBP2YOR124C 3819 nt2.02□□□□□ -2.09
RRP8P38961 INP2YMR163C 2118 nt2.02□□□□□ -2.09
RRP8P38961 YJR039WYJR039W 3366 nt2.02□□□□□ -2.09
RRP8P38961 LHS1YKL073W 2646 nt2.02□□□□□ -2.09
RRP8P38961 SRP14YDL092W 441 nt2.01□□□□□ -2.09
RRP8P38961 TRX1YLR043C 312 nt2.01□□□□□ -2.09
RRP8P38961 ABF2YMR072W 552 nt2.01□□□□□ -2.09
RRP8P38961 MLH3YPL164C 2148 nt2.01□□□□□ -2.09
RRP8P38961 snR49snR49 165 nt2.01□□□□□ -2.09
RRP8P38961 SAS3YBL052C 2496 nt2□□□□□ -2.09
RRP8P38961 PEP1YBL017C 4740 nt2□□□□□ -2.09
RRP8P38961 KIP1YBL063W 3336 nt2□□□□□ -2.09
RRP8P38961 HIR3YJR140C 4947 nt2□□□□□ -2.09
RRP8P38961 SDH2YLL041C 801 nt2□□□□□ -2.09
RRP8P38961 YOR008C-AYOR008C-A 225 nt2□□□□□ -2.09
RRP8P38961 YNL144CYNL144C 2223 nt2□□□□□ -2.09
RRP8P38961 NPR2YEL062W 1848 nt2□□□□□ -2.09
RRP8P38961 UTP21YLR409C 2820 nt1.98□□□□□ -2.09
RRP8P38961 CDC36YDL165W 576 nt1.97□□□□□ -2.09
RRP8P38961 YMR172C-AYMR172C-A 384 nt1.97□□□□□ -2.09
RRP8P38961 SPC98YNL126W 2541 nt1.97□□□□□ -2.09
RRP8P38961 PKH3YDR466W 2697 nt1.97□□□□□ -2.09
RRP8P38961 NIP100YPL174C 2607 nt1.97□□□□□ -2.09
RRP8P38961 MSH5YDL154W 2706 nt1.97□□□□□ -2.09
RRP8P38961 YLR120W-AYLR120W-A 102 nt1.96□□□□□ -2.1
RRP8P38961 LCD1YDR499W 2244 nt1.96□□□□□ -2.1
RRP8P38961 VIK1YPL253C 1944 nt1.95□□□□□ -2.1
RRP8P38961 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
RRP8P38961 DGR2YKL121W 2559 nt1.95□□□□□ -2.1
RRP8P38961 YDR182W-AYDR182W-A 204 nt1.95□□□□□ -2.1
RRP8P38961 CSE2YNR010W 450 nt1.95□□□□□ -2.1
RRP8P38961 CFT1YDR301W 4074 nt1.95□□□□□ -2.1
RRP8P38961 SPT21YMR179W 2277 nt1.94□□□□□ -2.1
RRP8P38961 SFB2YNL049C 2631 nt1.94□□□□□ -2.1
RRP8P38961 ENV11YGR071C 2583 nt1.94□□□□□ -2.1
RRP8P38961 YGL052WYGL052W 306 nt1.94□□□□□ -2.1
RRP8P38961 ANS1YHR126C 480 nt1.94□□□□□ -2.1
RRP8P38961 YHR210CYHR210C 1026 nt1.94□□□□□ -2.1
RRP8P38961 YJL197C-AYJL197C-A 282 nt1.94□□□□□ -2.1
RRP8P38961 YMR321CYMR321C 318 nt1.94□□□□□ -2.1
RRP8P38961 YOL155W-AYOL155W-A 135 nt1.94□□□□□ -2.1
RRP8P38961 YOR302WYOR302W 78 nt1.94□□□□□ -2.1
RRP8P38961 SEC5YDR166C 2916 nt1.94□□□□□ -2.1
RRP8P38961 RTP1YMR185W 2946 nt1.94□□□□□ -2.1
RRP8P38961 TRM3YDL112W 4311 nt1.93□□□□□ -2.1
RRP8P38961 tT(UGU)HtT(UGU)H 72 nt1.93□□□□□ -2.1
RRP8P38961 COA6YMR244C-A 315 nt1.93□□□□□ -2.1
RRP8P38961 IES4YOR189W 351 nt1.93□□□□□ -2.1
RRP8P38961 YCR018C-AYCR018C-A 255 nt1.92□□□□□ -2.1
RRP8P38961 YNL028WYNL028W 318 nt1.92□□□□□ -2.1
RRP8P38961 LRE1YCL051W 1752 nt1.91□□□□□ -2.1
RRP8P38961 tF(GAA)QtF(GAA)Q 75 nt1.91□□□□□ -2.1
RRP8P38961 PFD1YJL179W 330 nt1.91□□□□□ -2.1
RRP8P38961 SPO75YLL005C 2607 nt1.91□□□□□ -2.1
RRP8P38961 BRR2YER172C 6492 nt1.91□□□□□ -2.1
RRP8P38961 YCK3YER123W 1575 nt1.9□□□□□ -2.1
RRP8P38961 CTF4YPR135W 2784 nt1.9□□□□□ -2.1
RRP8P38961 VPS54YDR027C 2670 nt1.9□□□□□ -2.1
RRP8P38961 PAU2YEL049W 363 nt1.9□□□□□ -2.11
RRP8P38961 YMR247W-AYMR247W-A 144 nt1.9□□□□□ -2.11
RRP8P38961 YOL160WYOL160W 342 nt1.9□□□□□ -2.11
RRP8P38961 AI5_ALPHAQ0070 1893 nt1.89□□□□□ -2.11
RRP8P38961 PAM16YJL104W 450 nt1.89□□□□□ -2.11
RRP8P38961 YOR225WYOR225W 330 nt1.89□□□□□ -2.11
RRP8P38961 TDA9YML081W 3756 nt1.89□□□□□ -2.11
RRP8P38961 SKI3YPR189W 4299 nt1.88□□□□□ -2.11
RRP8P38961 snR55snR55 98 nt1.88□□□□□ -2.11
RRP8P38961 GPG1YGL121C 381 nt1.88□□□□□ -2.11
RRP8P38961 APQ12YIL040W 417 nt1.88□□□□□ -2.11
RRP8P38961 BLI1YKL061W 342 nt1.88□□□□□ -2.11
RRP8P38961 YBL008W-AYBL008W-A 240 nt1.88□□□□□ -2.11
RRP8P38961 YOR108C-AYOR108C-A 210 nt1.88□□□□□ -2.11
RRP8P38961 PDE2YOR360C 1581 nt1.88□□□□□ -2.11
RRP8P38961 ZIP2YGL249W 2115 nt1.88□□□□□ -2.11
RRP8P38961 snR74snR74 88 nt1.87□□□□□ -2.11
RRP8P38961 ADR1YDR216W 3972 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 9 ms