Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGCLP35914 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGCLP35914 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCLP35914 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HMGCLP35914 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLP35914 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLP35914 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.05■□□□□ 0.8
HMGCLP35914 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLP35914 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.05■□□□□ 0.8
HMGCLP35914 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLP35914 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLP35914 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HMGCLP35914 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLP35914 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCLP35914 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCLP35914 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCLP35914 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HMGCLP35914 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMGCLP35914 HLA-G-202ENST00000376815 851 ntBASIC20.04■□□□□ 0.8
HMGCLP35914 HLA-G-203ENST00000376818 1127 ntBASIC20.04■□□□□ 0.8
HMGCLP35914 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCLP35914 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCLP35914 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLP35914 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCLP35914 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLP35914 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLP35914 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
HMGCLP35914 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCLP35914 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGCLP35914 AC005829.2-201ENST00000571422 1056 ntBASIC20.03■□□□□ 0.8
HMGCLP35914 AC060766.5-201ENST00000590539 871 ntBASIC20.03■□□□□ 0.8
HMGCLP35914 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCLP35914 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMGCLP35914 AC099778.1-201ENST00000568593 1911 ntBASIC20.03■□□□□ 0.8
HMGCLP35914 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLP35914 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLP35914 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HMGCLP35914 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGCLP35914 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLP35914 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLP35914 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCLP35914 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLP35914 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLP35914 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLP35914 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HMGCLP35914 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
HMGCLP35914 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HMGCLP35914 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGCLP35914 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HMGCLP35914 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HMGCLP35914 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.02■□□□□ 0.8
HMGCLP35914 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.02■□□□□ 0.8
HMGCLP35914 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.02■□□□□ 0.8
HMGCLP35914 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms