Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 BRP1YGL007W 378 nt2.27□□□□□ -2.05
RPD3P32561 YIR044CYIR044C 186 nt2.27□□□□□ -2.05
RPD3P32561 YBR131C-AYBR131C-A 90 nt2.27□□□□□ -2.05
RPD3P32561 RAD34YDR314C 2079 nt2.27□□□□□ -2.05
RPD3P32561 MLH1YMR167W 2310 nt2.26□□□□□ -2.05
RPD3P32561 SEC26YDR238C 2922 nt2.26□□□□□ -2.05
RPD3P32561 YDR182W-AYDR182W-A 204 nt2.26□□□□□ -2.05
RPD3P32561 YJL120WYJL120W 324 nt2.26□□□□□ -2.05
RPD3P32561 RPS25BYLR333C 327 nt2.26□□□□□ -2.05
RPD3P32561 YOR381W-AYOR381W-A 168 nt2.26□□□□□ -2.05
RPD3P32561 ARP8YOR141C 2646 nt2.25□□□□□ -2.05
RPD3P32561 NAM7YMR080C 2916 nt2.25□□□□□ -2.05
RPD3P32561 SGS1YMR190C 4344 nt2.25□□□□□ -2.05
RPD3P32561 Q0143Q0143 153 nt2.25□□□□□ -2.05
RPD3P32561 snR52snR52 92 nt2.25□□□□□ -2.05
RPD3P32561 SPO21YOL091W 1830 nt2.25□□□□□ -2.05
RPD3P32561 TRL1YJL087C 2484 nt2.25□□□□□ -2.05
RPD3P32561 SSD1YDR293C 3753 nt2.25□□□□□ -2.05
RPD3P32561 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
RPD3P32561 MAD1YGL086W 2250 nt2.24□□□□□ -2.05
RPD3P32561 HSH155YMR288W 2916 nt2.24□□□□□ -2.05
RPD3P32561 RPS17AYML024W 411 nt2.24□□□□□ -2.05
RPD3P32561 CDC60YPL160W 3273 nt2.23□□□□□ -2.05
RPD3P32561 APL2YKL135C 2181 nt2.23□□□□□ -2.05
RPD3P32561 ENV11YGR071C 2583 nt2.23□□□□□ -2.05
RPD3P32561 YGR164WYGR164W 336 nt2.23□□□□□ -2.05
RPD3P32561 YOR161W-BYOR161W-B 261 nt2.23□□□□□ -2.05
RPD3P32561 YLR035C-AYLR035C-A 3468 nt2.23□□□□□ -2.05
RPD3P32561 TOF1YNL273W 3717 nt2.22□□□□□ -2.05
RPD3P32561 YDR341CYDR341C 1824 nt2.22□□□□□ -2.05
RPD3P32561 YKL165C-AYKL165C-A 234 nt2.22□□□□□ -2.05
RPD3P32561 RTT107YHR154W 3213 nt2.22□□□□□ -2.05
RPD3P32561 NCA2YPR155C 1851 nt2.22□□□□□ -2.05
RPD3P32561 MLH3YPL164C 2148 nt2.21□□□□□ -2.06
RPD3P32561 PTP2YOR208W 2253 nt2.21□□□□□ -2.06
RPD3P32561 YEL073CYEL073C 324 nt2.21□□□□□ -2.06
RPD3P32561 ATP7YKL016C 525 nt2.21□□□□□ -2.06
RPD3P32561 NOC3YLR002C 1992 nt2.21□□□□□ -2.06
RPD3P32561 TRA1YHR099W 11235 nt2.21□□□□□ -2.06
RPD3P32561 UBR1YGR184C 5853 nt2.2□□□□□ -2.06
RPD3P32561 PET309YLR067C 2898 nt2.2□□□□□ -2.06
RPD3P32561 NEW1YPL226W 3591 nt2.2□□□□□ -2.06
RPD3P32561 VTC1YER072W 390 nt2.2□□□□□ -2.06
RPD3P32561 COF1YLL050C 432 nt2.2□□□□□ -2.06
RPD3P32561 SVL3YPL032C 2478 nt2.2□□□□□ -2.06
RPD3P32561 BUD2YKL092C 3315 nt2.2□□□□□ -2.06
RPD3P32561 CUL3YGR003W 2235 nt2.19□□□□□ -2.06
RPD3P32561 HMI1YOL095C 2121 nt2.19□□□□□ -2.06
RPD3P32561 MSH5YDL154W 2706 nt2.19□□□□□ -2.06
RPD3P32561 SYH1YPL105C 2550 nt2.19□□□□□ -2.06
RPD3P32561 CTR9YOL145C 3234 nt2.19□□□□□ -2.06
RPD3P32561 VPS13YLL040C 9435 nt2.18□□□□□ -2.06
RPD3P32561 YLL007CYLL007C 1998 nt2.18□□□□□ -2.06
RPD3P32561 TDA9YML081W 3756 nt2.18□□□□□ -2.06
RPD3P32561 YHR180W-AYHR180W-A 183 nt2.18□□□□□ -2.06
RPD3P32561 YIL156W-BYIL156W-B 222 nt2.18□□□□□ -2.06
RPD3P32561 DGR2YKL121W 2559 nt2.18□□□□□ -2.06
RPD3P32561 CAT2YML042W 2013 nt2.18□□□□□ -2.06
RPD3P32561 INO80YGL150C 4470 nt2.18□□□□□ -2.06
RPD3P32561 YPL150WYPL150W 2706 nt2.18□□□□□ -2.06
RPD3P32561 REV3YPL167C 4515 nt2.17□□□□□ -2.06
RPD3P32561 YOR055WYOR055W 435 nt2.17□□□□□ -2.06
RPD3P32561 RPL33BYOR234C 324 nt2.17□□□□□ -2.06
RPD3P32561 RTT101YJL047C 2529 nt2.17□□□□□ -2.06
RPD3P32561 RGA1YOR127W 3024 nt2.16□□□□□ -2.06
RPD3P32561 YKR075W-AYKR075W-A 270 nt2.16□□□□□ -2.06
RPD3P32561 PDR1YGL013C 3207 nt2.16□□□□□ -2.06
RPD3P32561 UBP1YDL122W 2430 nt2.16□□□□□ -2.06
RPD3P32561 PIG1YLR273C 1947 nt2.15□□□□□ -2.06
RPD3P32561 AGC1YPR021C 2709 nt2.15□□□□□ -2.06
RPD3P32561 AIM44YPL158C 2277 nt2.15□□□□□ -2.06
RPD3P32561 FKS3YMR306W 5358 nt2.15□□□□□ -2.07
RPD3P32561 PIP2YOR363C 2991 nt2.15□□□□□ -2.07
RPD3P32561 RPL37BYDR500C 267 nt2.15□□□□□ -2.07
RPD3P32561 TIM9YEL020W-A 264 nt2.15□□□□□ -2.07
RPD3P32561 YHR210CYHR210C 1026 nt2.15□□□□□ -2.07
RPD3P32561 PHO91YNR013C 2685 nt2.15□□□□□ -2.07
RPD3P32561 YOL098CYOL098C 3114 nt2.14□□□□□ -2.07
RPD3P32561 RPL31AYDL075W 342 nt2.14□□□□□ -2.07
RPD3P32561 SNU13YEL026W 381 nt2.14□□□□□ -2.07
RPD3P32561 YHR032W-AYHR032W-A 180 nt2.14□□□□□ -2.07
RPD3P32561 YOR345CYOR345C 351 nt2.14□□□□□ -2.07
RPD3P32561 IRE1YHR079C 3348 nt2.14□□□□□ -2.07
RPD3P32561 YPR097WYPR097W 3222 nt2.13□□□□□ -2.07
RPD3P32561 PAU3YCR104W 375 nt2.13□□□□□ -2.07
RPD3P32561 YDL196WYDL196W 330 nt2.13□□□□□ -2.07
RPD3P32561 YLL019W-AYLL019W-A 93 nt2.13□□□□□ -2.07
RPD3P32561 FIG4YNL325C 2640 nt2.13□□□□□ -2.07
RPD3P32561 DNA2YHR164C 4569 nt2.13□□□□□ -2.07
RPD3P32561 GIP3YPL137C 3831 nt2.12□□□□□ -2.07
RPD3P32561 YCR087C-AYCR087C-A 462 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)G1tW(CCA)G1 72 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)G2tW(CCA)G2 72 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)JtW(CCA)J 72 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)KtW(CCA)K 72 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)MtW(CCA)M 72 nt2.12□□□□□ -2.07
RPD3P32561 tW(CCA)PtW(CCA)P 72 nt2.12□□□□□ -2.07
RPD3P32561 SIR4YDR227W 4077 nt2.11□□□□□ -2.07
RPD3P32561 RAV1YJR033C 4074 nt2.11□□□□□ -2.07
RPD3P32561 IST2YBR086C 2841 nt2.11□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms