Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
COL8A2P25067 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL8A2P25067 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL8A2P25067 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL8A2P25067 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COL8A2P25067 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL8A2P25067 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL8A2P25067 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL8A2P25067 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL8A2P25067 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
COL8A2P25067 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COL8A2P25067 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
COL8A2P25067 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL8A2P25067 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 RPPH1-201ENST00000516869 333 ntBASIC17.01■□□□□ 0.31
COL8A2P25067 AL121603.2-201ENST00000557373 2117 ntBASIC17.01■□□□□ 0.31
COL8A2P25067 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COL8A2P25067 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
COL8A2P25067 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL8A2P25067 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL8A2P25067 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17■□□□□ 0.31
COL8A2P25067 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
COL8A2P25067 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 AC069544.1-201ENST00000609399 999 ntBASIC17■□□□□ 0.31
COL8A2P25067 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 AP006294.2-201ENST00000641667 209 ntBASIC17■□□□□ 0.31
COL8A2P25067 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
COL8A2P25067 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17■□□□□ 0.31
COL8A2P25067 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL8A2P25067 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
COL8A2P25067 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.99■□□□□ 0.31
COL8A2P25067 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL8A2P25067 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.99■□□□□ 0.31
COL8A2P25067 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
COL8A2P25067 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.99■□□□□ 0.31
COL8A2P25067 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.99■□□□□ 0.31
COL8A2P25067 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
COL8A2P25067 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
COL8A2P25067 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.99■□□□□ 0.31
COL8A2P25067 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 FP700111.2-201ENST00000619190 1892 ntBASIC16.99■□□□□ 0.31
COL8A2P25067 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL8A2P25067 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL8A2P25067 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.99■□□□□ 0.31
COL8A2P25067 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.98■□□□□ 0.31
COL8A2P25067 AC006128.1-201ENST00000624704 1661 ntBASIC16.98■□□□□ 0.31
COL8A2P25067 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COL8A2P25067 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
COL8A2P25067 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
COL8A2P25067 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.98■□□□□ 0.31
COL8A2P25067 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL8A2P25067 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.98■□□□□ 0.31
COL8A2P25067 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.98■□□□□ 0.31
COL8A2P25067 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.98■□□□□ 0.31
COL8A2P25067 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL8A2P25067 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms