Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CCL1P22362 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.34■□□□□ 0.37
CCL1P22362 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCL1P22362 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL1P22362 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL1P22362 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 DUX4L16-201ENST00000555130 1264 ntBASIC17.34■□□□□ 0.37
CCL1P22362 AC068338.2-201ENST00000563278 1430 ntBASIC17.34■□□□□ 0.37
CCL1P22362 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL1P22362 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL1P22362 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL1P22362 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.34■□□□□ 0.37
CCL1P22362 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL1P22362 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCL1P22362 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL1P22362 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.33■□□□□ 0.37
CCL1P22362 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL1P22362 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL1P22362 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.33■□□□□ 0.37
CCL1P22362 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
CCL1P22362 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL1P22362 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.33■□□□□ 0.37
CCL1P22362 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCL1P22362 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.33■□□□□ 0.36
CCL1P22362 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL1P22362 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL1P22362 AC105020.6-201ENST00000621523 1217 ntBASIC17.33■□□□□ 0.36
CCL1P22362 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL1P22362 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL1P22362 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL1P22362 AL158211.5-201ENST00000623583 2518 ntBASIC17.32■□□□□ 0.36
CCL1P22362 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL1P22362 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCL1P22362 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCL1P22362 KRT8P17-201ENST00000453110 1448 ntBASIC17.32■□□□□ 0.36
CCL1P22362 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCL1P22362 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCL1P22362 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL1P22362 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.32■□□□□ 0.36
CCL1P22362 AC006015.1-201ENST00000429970 570 ntBASIC17.32■□□□□ 0.36
CCL1P22362 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.32■□□□□ 0.36
CCL1P22362 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.32■□□□□ 0.36
CCL1P22362 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.32■□□□□ 0.36
CCL1P22362 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.32■□□□□ 0.36
CCL1P22362 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL1P22362 AC009237.14-201ENST00000609975 1594 ntBASIC17.32■□□□□ 0.36
CCL1P22362 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL1P22362 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL1P22362 TREX1-205ENST00000625293 1783 ntBASIC17.31■□□□□ 0.36
CCL1P22362 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCL1P22362 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCL1P22362 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.31■□□□□ 0.36
CCL1P22362 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL1P22362 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL1P22362 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL1P22362 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL1P22362 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL1P22362 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCL1P22362 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCL1P22362 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.3■□□□□ 0.36
CCL1P22362 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CCL1P22362 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL1P22362 AC016769.1-201ENST00000409132 1010 ntBASIC17.3■□□□□ 0.36
CCL1P22362 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCL1P22362 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL1P22362 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms