Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NCK1P16333 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NCK1P16333 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.98■□□□□ 0.63
NCK1P16333 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NCK1P16333 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.98■□□□□ 0.63
NCK1P16333 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 AC096631.2-201ENST00000436136 790 ntBASIC18.98■□□□□ 0.63
NCK1P16333 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NCK1P16333 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.98■□□□□ 0.63
NCK1P16333 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.98■□□□□ 0.63
NCK1P16333 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NCK1P16333 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
NCK1P16333 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.98■□□□□ 0.63
NCK1P16333 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
NCK1P16333 BX119927.1-201ENST00000636596 1552 ntBASIC18.98■□□□□ 0.63
NCK1P16333 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NCK1P16333 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NCK1P16333 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.97■□□□□ 0.63
NCK1P16333 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
NCK1P16333 TREX1-205ENST00000625293 1783 ntBASIC18.97■□□□□ 0.63
NCK1P16333 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.97■□□□□ 0.63
NCK1P16333 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.97■□□□□ 0.63
NCK1P16333 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.97■□□□□ 0.63
NCK1P16333 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.97■□□□□ 0.63
NCK1P16333 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.97■□□□□ 0.63
NCK1P16333 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.97■□□□□ 0.63
NCK1P16333 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCK1P16333 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 RASA4CP-201ENST00000424092 1398 ntBASIC18.96■□□□□ 0.63
NCK1P16333 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.96■□□□□ 0.63
NCK1P16333 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.96■□□□□ 0.63
NCK1P16333 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.96■□□□□ 0.63
NCK1P16333 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 AF213884.3-201ENST00000563833 479 ntBASIC18.96■□□□□ 0.63
NCK1P16333 AC138907.5-202ENST00000569484 235 ntBASIC18.96■□□□□ 0.63
NCK1P16333 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
NCK1P16333 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NCK1P16333 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.96■□□□□ 0.63
NCK1P16333 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.96■□□□□ 0.63
NCK1P16333 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCK1P16333 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NCK1P16333 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NCK1P16333 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 KRT8P36-201ENST00000489121 1440 ntBASIC18.95■□□□□ 0.62
NCK1P16333 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.95■□□□□ 0.62
NCK1P16333 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.95■□□□□ 0.62
NCK1P16333 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.95■□□□□ 0.62
NCK1P16333 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.95■□□□□ 0.62
NCK1P16333 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.95■□□□□ 0.62
NCK1P16333 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NCK1P16333 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCK1P16333 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NCK1P16333 AC120498.9-201ENST00000339021 3867 ntBASIC18.95■□□□□ 0.62
NCK1P16333 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms