Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
H2AFXP16104 RARRES2P2-201ENST00000394842 485 ntBASIC20.93■□□□□ 0.94
H2AFXP16104 MIR3181-201ENST00000578512 73 ntBASIC20.93■□□□□ 0.94
H2AFXP16104 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
H2AFXP16104 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
H2AFXP16104 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 AC068880.1-201ENST00000507289 2297 ntBASIC20.93■□□□□ 0.94
H2AFXP16104 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2AFXP16104 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
H2AFXP16104 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.92■□□□□ 0.94
H2AFXP16104 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.92■□□□□ 0.94
H2AFXP16104 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.92■□□□□ 0.94
H2AFXP16104 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.92■□□□□ 0.94
H2AFXP16104 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.92■□□□□ 0.94
H2AFXP16104 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.92■□□□□ 0.94
H2AFXP16104 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.92■□□□□ 0.94
H2AFXP16104 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.92■□□□□ 0.94
H2AFXP16104 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
H2AFXP16104 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2AFXP16104 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.92■□□□□ 0.94
H2AFXP16104 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
H2AFXP16104 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.91■□□□□ 0.94
H2AFXP16104 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 AC092028.1-203ENST00000608262 953 ntBASIC20.91■□□□□ 0.94
H2AFXP16104 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
H2AFXP16104 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
H2AFXP16104 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2AFXP16104 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.9■□□□□ 0.94
H2AFXP16104 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
H2AFXP16104 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.9■□□□□ 0.94
H2AFXP16104 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 DPP3P2-201ENST00000416030 1696 ntBASIC20.9■□□□□ 0.94
H2AFXP16104 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.9■□□□□ 0.94
H2AFXP16104 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
H2AFXP16104 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.9■□□□□ 0.94
H2AFXP16104 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.9■□□□□ 0.94
H2AFXP16104 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2AFXP16104 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.89■□□□□ 0.94
H2AFXP16104 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
H2AFXP16104 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
H2AFXP16104 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2AFXP16104 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2AFXP16104 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
H2AFXP16104 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
H2AFXP16104 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2AFXP16104 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2AFXP16104 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
H2AFXP16104 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.89■□□□□ 0.93
H2AFXP16104 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.89■□□□□ 0.93
H2AFXP16104 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.89■□□□□ 0.93
H2AFXP16104 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2AFXP16104 AL354751.1-201ENST00000412768 1863 ntBASIC20.89■□□□□ 0.93
H2AFXP16104 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2AFXP16104 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
H2AFXP16104 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2AFXP16104 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.89■□□□□ 0.93
H2AFXP16104 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
H2AFXP16104 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms