Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CAPNS1P04632 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20■□□□□ 0.79
CAPNS1P04632 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CAPNS1P04632 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20■□□□□ 0.79
CAPNS1P04632 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CAPNS1P04632 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.99■□□□□ 0.79
CAPNS1P04632 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 KRT18P35-201ENST00000510488 1269 ntBASIC19.99■□□□□ 0.79
CAPNS1P04632 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPNS1P04632 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.99■□□□□ 0.79
CAPNS1P04632 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPNS1P04632 KRT17P2-201ENST00000300992 1314 ntBASIC19.99■□□□□ 0.79
CAPNS1P04632 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CAPNS1P04632 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPNS1P04632 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPNS1P04632 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.98■□□□□ 0.79
CAPNS1P04632 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CAPNS1P04632 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CAPNS1P04632 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CAPNS1P04632 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 TSPY7P-201ENST00000431358 1114 ntBASIC19.98■□□□□ 0.79
CAPNS1P04632 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.98■□□□□ 0.79
CAPNS1P04632 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 TSPY15P-201ENST00000457163 923 ntBASIC19.98■□□□□ 0.79
CAPNS1P04632 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPNS1P04632 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.98■□□□□ 0.79
CAPNS1P04632 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CAPNS1P04632 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.98■□□□□ 0.79
CAPNS1P04632 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPNS1P04632 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPNS1P04632 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 KRT17P1-201ENST00000399211 1546 ntBASIC19.97■□□□□ 0.79
CAPNS1P04632 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPNS1P04632 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPNS1P04632 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 AC073314.1-201ENST00000568729 2216 ntBASIC19.97■□□□□ 0.79
CAPNS1P04632 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 RPS2P55-201ENST00000397318 883 ntBASIC19.97■□□□□ 0.79
CAPNS1P04632 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPNS1P04632 AC107956.1-201ENST00000494359 873 ntBASIC19.97■□□□□ 0.79
CAPNS1P04632 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CAPNS1P04632 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.97■□□□□ 0.79
CAPNS1P04632 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.97■□□□□ 0.79
CAPNS1P04632 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPNS1P04632 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CAPNS1P04632 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPNS1P04632 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CAPNS1P04632 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPNS1P04632 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPNS1P04632 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPNS1P04632 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPNS1P04632 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPNS1P04632 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.96■□□□□ 0.79
CAPNS1P04632 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.96■□□□□ 0.79
CAPNS1P04632 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CAPNS1P04632 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPNS1P04632 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPNS1P04632 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms