Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.4■□□□□ 0.54
P04436 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04436 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
P04436 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.39■□□□□ 0.53
P04436 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
P04436 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.39■□□□□ 0.53
P04436 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 AL158047.1-201ENST00000445918 881 ntBASIC18.39■□□□□ 0.53
P04436 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
P04436 AC069544.1-201ENST00000609399 999 ntBASIC18.39■□□□□ 0.53
P04436 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.39■□□□□ 0.53
P04436 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 AC007375.3-201ENST00000600936 2314 ntBASIC18.39■□□□□ 0.53
P04436 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
P04436 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04436 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.38■□□□□ 0.53
P04436 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
P04436 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.38■□□□□ 0.53
P04436 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.38■□□□□ 0.53
P04436 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.38■□□□□ 0.53
P04436 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
P04436 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.38■□□□□ 0.53
P04436 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.38■□□□□ 0.53
P04436 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
P04436 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
P04436 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04436 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
P04436 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
P04436 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
P04436 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
P04436 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
P04436 GCSHP5-201ENST00000443090 522 ntBASIC18.37■□□□□ 0.53
P04436 AC098590.1-201ENST00000468126 897 ntBASIC18.37■□□□□ 0.53
P04436 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
P04436 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.37■□□□□ 0.53
P04436 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 AC092720.2-201ENST00000602388 1665 ntBASIC18.37■□□□□ 0.53
P04436 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
P04436 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
P04436 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P04436 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
P04436 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.37■□□□□ 0.53
P04436 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.37■□□□□ 0.53
P04436 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.36■□□□□ 0.53
P04436 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.36■□□□□ 0.53
P04436 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
P04436 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.36■□□□□ 0.53
P04436 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P04436 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04436 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
P04436 C1QBPP2-201ENST00000528754 825 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms