Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC133561.5-201ENST00000635547 218 ntBASIC22.03■■□□□ 1.12
CHRNA1P02708 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNA1P02708 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRNA1P02708 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.03■■□□□ 1.12
CHRNA1P02708 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.03■■□□□ 1.12
CHRNA1P02708 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CHRNA1P02708 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CHRNA1P02708 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.02■■□□□ 1.12
CHRNA1P02708 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.02■■□□□ 1.12
CHRNA1P02708 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.02■■□□□ 1.12
CHRNA1P02708 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.02■■□□□ 1.12
CHRNA1P02708 AL121603.2-201ENST00000557373 2117 ntBASIC22.02■■□□□ 1.12
CHRNA1P02708 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.02■■□□□ 1.12
CHRNA1P02708 AC026471.5-201ENST00000615068 467 ntBASIC22.02■■□□□ 1.12
CHRNA1P02708 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.02■■□□□ 1.12
CHRNA1P02708 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CHRNA1P02708 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CHRNA1P02708 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CHRNA1P02708 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHRNA1P02708 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.02■■□□□ 1.11
CHRNA1P02708 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.02■■□□□ 1.11
CHRNA1P02708 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHRNA1P02708 FEM1AP4-201ENST00000443167 1987 ntBASIC22.01■■□□□ 1.11
CHRNA1P02708 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
CHRNA1P02708 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.01■■□□□ 1.11
CHRNA1P02708 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CHRNA1P02708 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.01■■□□□ 1.11
CHRNA1P02708 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CHRNA1P02708 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 KRT18P21-201ENST00000515767 1272 ntBASIC22.01■■□□□ 1.11
CHRNA1P02708 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.01■■□□□ 1.11
CHRNA1P02708 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.01■■□□□ 1.11
CHRNA1P02708 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.01■■□□□ 1.11
CHRNA1P02708 AL121906.2-201ENST00000621597 723 ntBASIC22.01■■□□□ 1.11
CHRNA1P02708 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHRNA1P02708 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CHRNA1P02708 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 PLK5-205ENST00000642079 1969 ntBASIC22■■□□□ 1.11
CHRNA1P02708 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22■■□□□ 1.11
CHRNA1P02708 MIR1224-201ENST00000408193 85 ntBASIC22■■□□□ 1.11
CHRNA1P02708 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22■■□□□ 1.11
CHRNA1P02708 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CHRNA1P02708 AP003071.4-201ENST00000562276 1284 ntBASIC22■■□□□ 1.11
CHRNA1P02708 CD177P1-201ENST00000606252 935 ntBASIC22■■□□□ 1.11
CHRNA1P02708 AC012306.2-201ENST00000609350 630 ntBASIC22■■□□□ 1.11
CHRNA1P02708 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHRNA1P02708 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22■■□□□ 1.11
CHRNA1P02708 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22■■□□□ 1.11
CHRNA1P02708 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.99■■□□□ 1.11
CHRNA1P02708 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.99■■□□□ 1.11
CHRNA1P02708 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CHRNA1P02708 AL353708.3-201ENST00000610272 989 ntBASIC21.99■■□□□ 1.11
CHRNA1P02708 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 AC097493.4-201ENST00000641197 219 ntBASIC21.99■■□□□ 1.11
CHRNA1P02708 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CHRNA1P02708 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRNA1P02708 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNA1P02708 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.98■■□□□ 1.11
CHRNA1P02708 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 FAM197Y1-201ENST00000421178 764 ntBASIC21.98■■□□□ 1.11
CHRNA1P02708 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CHRNA1P02708 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.98■■□□□ 1.11
CHRNA1P02708 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CHRNA1P02708 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNA1P02708 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CHRNA1P02708 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CHRNA1P02708 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CHRNA1P02708 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CHRNA1P02708 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRNA1P02708 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRNA1P02708 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHRNA1P02708 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms