Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.48■□□□□ 0.71
KRT6AP02538 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.48■□□□□ 0.71
KRT6AP02538 AFG3L1P-217ENST00000557444 2447 ntBASIC19.48■□□□□ 0.71
KRT6AP02538 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
KRT6AP02538 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KRT6AP02538 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT6AP02538 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6AP02538 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6AP02538 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT6AP02538 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT6AP02538 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT6AP02538 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT6AP02538 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT6AP02538 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT6AP02538 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT6AP02538 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT6AP02538 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KRT6AP02538 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KRT6AP02538 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT6AP02538 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT6AP02538 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT6AP02538 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT6AP02538 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT6AP02538 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KRT6AP02538 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6AP02538 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT6AP02538 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6AP02538 MFSD11-216ENST00000590393 1141 ntBASIC19.45■□□□□ 0.7
KRT6AP02538 AC016405.3-201ENST00000607710 860 ntBASIC19.45■□□□□ 0.7
KRT6AP02538 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT6AP02538 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT6AP02538 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT6AP02538 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT6AP02538 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KRT6AP02538 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT6AP02538 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT6AP02538 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KRT6AP02538 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT6AP02538 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT6AP02538 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6AP02538 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6AP02538 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
KRT6AP02538 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 AC100791.3-201ENST00000617619 330 ntBASIC19.43■□□□□ 0.7
KRT6AP02538 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT6AP02538 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT6AP02538 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KRT6AP02538 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT6AP02538 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms