Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC007322.1-201ENST00000426983 750 ntBASIC19.47■□□□□ 0.71
CLDN9O95484 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN9O95484 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN9O95484 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN9O95484 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN9O95484 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN9O95484 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLDN9O95484 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CLDN9O95484 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN9O95484 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLDN9O95484 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN9O95484 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN9O95484 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN9O95484 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN9O95484 AC008694.1-202ENST00000636953 945 ntBASIC19.46■□□□□ 0.71
CLDN9O95484 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN9O95484 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN9O95484 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN9O95484 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN9O95484 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN9O95484 BX119927.1-201ENST00000636596 1552 ntBASIC19.45■□□□□ 0.7
CLDN9O95484 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLDN9O95484 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLDN9O95484 CYP2T1P-201ENST00000432607 1285 ntBASIC19.45■□□□□ 0.7
CLDN9O95484 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN9O95484 AC022517.1-201ENST00000592429 346 ntBASIC19.45■□□□□ 0.7
CLDN9O95484 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN9O95484 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN9O95484 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN9O95484 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN9O95484 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN9O95484 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 KRT18P68-201ENST00000392293 1000 ntBASIC19.44■□□□□ 0.7
CLDN9O95484 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN9O95484 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN9O95484 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLDN9O95484 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CLDN9O95484 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN9O95484 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN9O95484 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN9O95484 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CLDN9O95484 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN9O95484 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN9O95484 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN9O95484 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN9O95484 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN9O95484 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN9O95484 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CLDN9O95484 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLDN9O95484 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN9O95484 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN9O95484 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN9O95484 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN9O95484 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN9O95484 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN9O95484 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN9O95484 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN9O95484 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN9O95484 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms