Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.47■■□□□ 1.67
CACNA1FO60840 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CACNA1FO60840 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CACNA1FO60840 YBX1P10-201ENST00000444752 975 ntBASIC25.47■■□□□ 1.67
CACNA1FO60840 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.47■■□□□ 1.67
CACNA1FO60840 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CACNA1FO60840 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
CACNA1FO60840 AL162377.1-201ENST00000618844 1793 ntBASIC25.47■■□□□ 1.67
CACNA1FO60840 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CACNA1FO60840 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CACNA1FO60840 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.46■■□□□ 1.67
CACNA1FO60840 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.46■■□□□ 1.67
CACNA1FO60840 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.46■■□□□ 1.67
CACNA1FO60840 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CACNA1FO60840 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.45■■□□□ 1.67
CACNA1FO60840 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
CACNA1FO60840 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.67
CACNA1FO60840 UNC93B4-201ENST00000505679 747 ntBASIC25.45■■□□□ 1.67
CACNA1FO60840 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.45■■□□□ 1.67
CACNA1FO60840 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.45■■□□□ 1.67
CACNA1FO60840 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.45■■□□□ 1.67
CACNA1FO60840 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CACNA1FO60840 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
CACNA1FO60840 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CACNA1FO60840 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CACNA1FO60840 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CACNA1FO60840 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CACNA1FO60840 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.45■■□□□ 1.66
CACNA1FO60840 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.45■■□□□ 1.66
CACNA1FO60840 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.45■■□□□ 1.66
CACNA1FO60840 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 SMG8-203ENST00000578922 2178 ntBASIC25.44■■□□□ 1.66
CACNA1FO60840 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.44■■□□□ 1.66
CACNA1FO60840 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
CACNA1FO60840 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.44■■□□□ 1.66
CACNA1FO60840 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.44■■□□□ 1.66
CACNA1FO60840 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.44■■□□□ 1.66
CACNA1FO60840 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 AP001271.2-201ENST00000624018 1556 ntBASIC25.44■■□□□ 1.66
CACNA1FO60840 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.44■■□□□ 1.66
CACNA1FO60840 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.44■■□□□ 1.66
CACNA1FO60840 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CACNA1FO60840 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.44■■□□□ 1.66
CACNA1FO60840 AC124016.1-201ENST00000609552 612 ntBASIC25.44■■□□□ 1.66
CACNA1FO60840 AC073648.6-201ENST00000641589 218 ntBASIC25.44■■□□□ 1.66
CACNA1FO60840 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CACNA1FO60840 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.43■■□□□ 1.66
CACNA1FO60840 PHGDH-210ENST00000641115 1638 ntBASIC25.43■■□□□ 1.66
CACNA1FO60840 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.43■■□□□ 1.66
CACNA1FO60840 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.43■■□□□ 1.66
CACNA1FO60840 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 AC006557.6-201ENST00000623071 864 ntBASIC25.43■■□□□ 1.66
CACNA1FO60840 AL512408.1-201ENST00000569378 2000 ntBASIC25.43■■□□□ 1.66
CACNA1FO60840 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.43■■□□□ 1.66
CACNA1FO60840 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.43■■□□□ 1.66
CACNA1FO60840 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CACNA1FO60840 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.42■■□□□ 1.66
CACNA1FO60840 AC128676.1-201ENST00000454392 318 ntBASIC25.42■■□□□ 1.66
CACNA1FO60840 AL359736.2-201ENST00000621992 437 ntBASIC25.42■■□□□ 1.66
CACNA1FO60840 TMEM191A-211ENST00000637163 1067 ntBASIC25.42■■□□□ 1.66
CACNA1FO60840 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.42■■□□□ 1.66
CACNA1FO60840 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CACNA1FO60840 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CACNA1FO60840 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CACNA1FO60840 AC012618.2-201ENST00000428058 849 ntBASIC25.42■■□□□ 1.66
CACNA1FO60840 C1QBPP2-201ENST00000528754 825 ntBASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms