Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SSNA1O43805 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.16■□□□□ 0.34
SSNA1O43805 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.16■□□□□ 0.34
SSNA1O43805 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSNA1O43805 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSNA1O43805 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSNA1O43805 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.16■□□□□ 0.34
SSNA1O43805 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
SSNA1O43805 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SSNA1O43805 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SSNA1O43805 AL049812.1-201ENST00000432563 2267 ntBASIC17.16■□□□□ 0.34
SSNA1O43805 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
SSNA1O43805 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.15■□□□□ 0.34
SSNA1O43805 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.15■□□□□ 0.34
SSNA1O43805 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.15■□□□□ 0.34
SSNA1O43805 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.15■□□□□ 0.34
SSNA1O43805 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSNA1O43805 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.14■□□□□ 0.33
SSNA1O43805 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SSNA1O43805 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 RNF126P1-201ENST00000567452 1320 ntBASIC17.14■□□□□ 0.33
SSNA1O43805 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSNA1O43805 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.14■□□□□ 0.33
SSNA1O43805 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.14■□□□□ 0.33
SSNA1O43805 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SSNA1O43805 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SSNA1O43805 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.13■□□□□ 0.33
SSNA1O43805 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.13■□□□□ 0.33
SSNA1O43805 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.13■□□□□ 0.33
SSNA1O43805 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.13■□□□□ 0.33
SSNA1O43805 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 Z82202.1-201ENST00000623446 1880 ntBASIC17.13■□□□□ 0.33
SSNA1O43805 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSNA1O43805 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SSNA1O43805 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 BHLHE23-202ENST00000612929 1109 ntBASIC17.12■□□□□ 0.33
SSNA1O43805 MIR7108-201ENST00000614319 87 ntBASIC17.12■□□□□ 0.33
SSNA1O43805 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms