Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ARHGEF9O43307 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ARHGEF9O43307 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 LINC01006-201ENST00000333319 2292 ntBASIC18.56■□□□□ 0.56
ARHGEF9O43307 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ARHGEF9O43307 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARHGEF9O43307 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
ARHGEF9O43307 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 POU5F1P4-201ENST00000413175 1085 ntBASIC18.55■□□□□ 0.56
ARHGEF9O43307 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ARHGEF9O43307 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARHGEF9O43307 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 AC087289.5-201ENST00000586076 3175 ntBASIC18.54■□□□□ 0.56
ARHGEF9O43307 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 MIR663A-201ENST00000385250 93 ntBASIC18.54■□□□□ 0.56
ARHGEF9O43307 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ARHGEF9O43307 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ARHGEF9O43307 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF9O43307 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF9O43307 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF9O43307 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ARHGEF9O43307 AC138907.5-202ENST00000569484 235 ntBASIC18.52■□□□□ 0.56
ARHGEF9O43307 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.52■□□□□ 0.56
ARHGEF9O43307 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms