Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.11■■□□□ 1.45
FOXN1O15353 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.11■■□□□ 1.45
FOXN1O15353 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXN1O15353 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FOXN1O15353 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXN1O15353 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.1■■□□□ 1.45
FOXN1O15353 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FOXN1O15353 AC120498.8-201ENST00000614275 531 ntBASIC24.1■■□□□ 1.45
FOXN1O15353 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXN1O15353 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXN1O15353 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXN1O15353 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
FOXN1O15353 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
FOXN1O15353 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXN1O15353 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.09■■□□□ 1.45
FOXN1O15353 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.09■■□□□ 1.45
FOXN1O15353 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.09■■□□□ 1.45
FOXN1O15353 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.09■■□□□ 1.45
FOXN1O15353 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.09■■□□□ 1.45
FOXN1O15353 AP000525.1-201ENST00000608286 694 ntBASIC24.09■■□□□ 1.45
FOXN1O15353 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.09■■□□□ 1.45
FOXN1O15353 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
FOXN1O15353 AC087633.2-202ENST00000565166 1439 ntBASIC24.09■■□□□ 1.45
FOXN1O15353 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
FOXN1O15353 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXN1O15353 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXN1O15353 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
FOXN1O15353 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
FOXN1O15353 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXN1O15353 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
FOXN1O15353 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXN1O15353 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.08■■□□□ 1.45
FOXN1O15353 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.08■■□□□ 1.45
FOXN1O15353 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
FOXN1O15353 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.45
FOXN1O15353 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.08■■□□□ 1.45
FOXN1O15353 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.08■■□□□ 1.45
FOXN1O15353 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXN1O15353 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
FOXN1O15353 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.44
FOXN1O15353 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
FOXN1O15353 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.07■■□□□ 1.44
FOXN1O15353 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 MIR1238-201ENST00000408483 83 ntBASIC24.07■■□□□ 1.44
FOXN1O15353 AC091799.1-201ENST00000422823 811 ntBASIC24.07■■□□□ 1.44
FOXN1O15353 AL450487.1-201ENST00000426799 995 ntBASIC24.07■■□□□ 1.44
FOXN1O15353 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
FOXN1O15353 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.07■■□□□ 1.44
FOXN1O15353 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.07■■□□□ 1.44
FOXN1O15353 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.07■■□□□ 1.44
FOXN1O15353 AC006011.2-201ENST00000621313 1158 ntBASIC24.07■■□□□ 1.44
FOXN1O15353 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
FOXN1O15353 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FOXN1O15353 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.07■■□□□ 1.44
FOXN1O15353 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.06■■□□□ 1.44
FOXN1O15353 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.06■■□□□ 1.44
FOXN1O15353 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
FOXN1O15353 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
FOXN1O15353 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.06■■□□□ 1.44
FOXN1O15353 AL034346.1-201ENST00000568244 1277 ntBASIC24.06■■□□□ 1.44
FOXN1O15353 AF186192.3-201ENST00000583427 947 ntBASIC24.06■■□□□ 1.44
FOXN1O15353 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.06■■□□□ 1.44
FOXN1O15353 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.06■■□□□ 1.44
FOXN1O15353 AL031963.3-201ENST00000606441 850 ntBASIC24.06■■□□□ 1.44
FOXN1O15353 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.06■■□□□ 1.44
FOXN1O15353 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 CYP2D8P-201ENST00000433633 1490 ntBASIC24.06■■□□□ 1.44
FOXN1O15353 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
FOXN1O15353 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.05■■□□□ 1.44
FOXN1O15353 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.05■■□□□ 1.44
FOXN1O15353 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
FOXN1O15353 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms