Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NACAE9PAV3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NACAE9PAV3 AC116050.2-201ENST00000612102 1779 ntBASIC14.64□□□□□ -0.07
NACAE9PAV3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
NACAE9PAV3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NACAE9PAV3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.64□□□□□ -0.07
NACAE9PAV3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.64□□□□□ -0.07
NACAE9PAV3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NACAE9PAV3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.64□□□□□ -0.07
NACAE9PAV3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NACAE9PAV3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.64□□□□□ -0.07
NACAE9PAV3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NACAE9PAV3 AC011767.1-201ENST00000617410 1153 ntBASIC14.64□□□□□ -0.07
NACAE9PAV3 AC120498.10-201ENST00000621827 505 ntBASIC14.64□□□□□ -0.07
NACAE9PAV3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
NACAE9PAV3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.63□□□□□ -0.07
NACAE9PAV3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NACAE9PAV3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NACAE9PAV3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.63□□□□□ -0.07
NACAE9PAV3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NACAE9PAV3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 GUSBP6-202ENST00000438529 1198 ntBASIC14.62□□□□□ -0.07
NACAE9PAV3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 AL109923.1-201ENST00000618799 583 ntBASIC14.62□□□□□ -0.07
NACAE9PAV3 AC231657.2-201ENST00000624556 255 ntBASIC14.62□□□□□ -0.07
NACAE9PAV3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 AC099778.1-201ENST00000568593 1911 ntBASIC14.62□□□□□ -0.07
NACAE9PAV3 AL162377.1-201ENST00000618844 1793 ntBASIC14.62□□□□□ -0.07
NACAE9PAV3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
NACAE9PAV3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NACAE9PAV3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NACAE9PAV3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.62□□□□□ -0.07
NACAE9PAV3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NACAE9PAV3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms