Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 SOX15-203ENST00000570788 1093 ntBASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM200CA6NKL6 PTBP1P-201ENST00000554374 1601 ntBASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM200CA6NKL6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 PRORSD1P-201ENST00000295112 541 ntBASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 AC006058.3-201ENST00000606217 1069 ntBASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM200CA6NKL6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 AC128676.1-201ENST00000454392 318 ntBASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 AC006557.6-201ENST00000623071 864 ntBASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM200CA6NKL6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 AC023632.3-201ENST00000521633 145 ntBASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 AC073648.6-201ENST00000641589 218 ntBASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM200CA6NKL6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms