Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC004987.1-201ENST00000428627 508 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 ATP5G2P3-201ENST00000429083 425 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 AC010980.1-201ENST00000587192 1142 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 LINC01465-201ENST00000408887 1940 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 FZD10-202ENST00000539839 3282 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 BX005040.4-201ENST00000637145 1518 ntBASIC15.89■□□□□ 0.13
RBFOX3A6NFN3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RBFOX3A6NFN3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.87■□□□□ 0.13
RBFOX3A6NFN3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 PCDHB18P-201ENST00000524813 2368 ntBASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RBFOX3A6NFN3 AC018470.1-201ENST00000624790 3129 ntBASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms