Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 TPRG1LP1-201ENST00000598702 760 ntBASIC17.15■□□□□ 0.34
TMEM235A6NFC5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 AC093484.2-201ENST00000580996 2166 ntBASIC17.15■□□□□ 0.34
TMEM235A6NFC5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM235A6NFC5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM235A6NFC5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.14■□□□□ 0.33
TMEM235A6NFC5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM235A6NFC5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 KRT87P-202ENST00000534226 1464 ntBASIC17.13■□□□□ 0.33
TMEM235A6NFC5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 AC012414.1-201ENST00000556676 535 ntBASIC17.13■□□□□ 0.33
TMEM235A6NFC5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM235A6NFC5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 BX119927.1-201ENST00000636596 1552 ntBASIC17.12■□□□□ 0.33
TMEM235A6NFC5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 AP001330.3-201ENST00000520123 633 ntBASIC17.12■□□□□ 0.33
TMEM235A6NFC5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 AC120498.10-201ENST00000621827 505 ntBASIC17.12■□□□□ 0.33
TMEM235A6NFC5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TMEM235A6NFC5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM235A6NFC5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms