Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TBC1D3FA6NER0 PLK5-205ENST00000642079 1969 ntBASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 SNORA78-201ENST00000459373 127 ntBASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D3FA6NER0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TBC1D3FA6NER0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.08■□□□□ 0.81
TBC1D3FA6NER0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TBC1D3FA6NER0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TBC1D3FA6NER0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.08■□□□□ 0.8
TBC1D3FA6NER0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.08■□□□□ 0.8
TBC1D3FA6NER0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TBC1D3FA6NER0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 RPS2P55-201ENST00000397318 883 ntBASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 AC107956.1-201ENST00000494359 873 ntBASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D3FA6NER0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 AL121829.2-201ENST00000620908 328 ntBASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 AC124283.5-201ENST00000624661 1809 ntBASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
TBC1D3FA6NER0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 HLA-G-202ENST00000376815 851 ntBASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 HLA-G-203ENST00000376818 1127 ntBASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 AC012618.2-201ENST00000428058 849 ntBASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3FA6NER0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms