Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H12DA2A288 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 AC069236.1-201ENST00000604339 616 ntBASIC18.38■□□□□ 0.53
ZC3H12DA2A288 AL050303.2-201ENST00000619798 666 ntBASIC18.38■□□□□ 0.53
ZC3H12DA2A288 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 AC087633.2-202ENST00000565166 1439 ntBASIC18.38■□□□□ 0.53
ZC3H12DA2A288 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H12DA2A288 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 AC026185.1-201ENST00000445748 174 ntBASIC18.37■□□□□ 0.53
ZC3H12DA2A288 AC093787.1-201ENST00000450396 207 ntBASIC18.37■□□□□ 0.53
ZC3H12DA2A288 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
ZC3H12DA2A288 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 MIR663A-201ENST00000385250 93 ntBASIC18.36■□□□□ 0.53
ZC3H12DA2A288 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 CROCCP5-201ENST00000436658 830 ntBASIC18.36■□□□□ 0.53
ZC3H12DA2A288 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 AL356652.1-201ENST00000615962 565 ntBASIC18.36■□□□□ 0.53
ZC3H12DA2A288 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 AC008694.1-202ENST00000636953 945 ntBASIC18.36■□□□□ 0.53
ZC3H12DA2A288 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZC3H12DA2A288 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZC3H12DA2A288 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms