Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC163A0A0D9SF12 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 AC104076.2-201ENST00000448912 469 ntBASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 AC026271.3-201ENST00000571884 352 ntBASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 NTF6B-201ENST00000591913 560 ntBASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC163A0A0D9SF12 FSCN1P1-201ENST00000568912 1481 ntBASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 C2orf69P3-201ENST00000565542 1120 ntBASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC163A0A0D9SF12 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 AP005242.2-201ENST00000580065 1175 ntBASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC163A0A0D9SF12 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 DGCR10-201ENST00000609839 495 ntBASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC163A0A0D9SF12 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC163A0A0D9SF12 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms