Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 AL691432.2-201ENST00000607222 2038 ntBASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV9-1A0A075B6T8 NOC2LP2-201ENST00000407594 1944 ntBASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 AC129492.7-201ENST00000622992 756 ntBASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV9-1A0A075B6T8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 MIR639-201ENST00000384974 98 ntBASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 RPS2P35-201ENST00000443417 897 ntBASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV9-1A0A075B6T8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 AIRN-201ENST00000601203 4374 ntBASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV9-1A0A075B6T8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV9-1A0A075B6T8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV9-1A0A075B6T8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV9-1A0A075B6T8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAV9-1A0A075B6T8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 AC020763.4-201ENST00000623414 4170 ntBASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 OR2I1P-207ENST00000453522 948 ntBASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV9-1A0A075B6T8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms