Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC6.51□□□□□ -1.37
AP3S2P59780 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.51□□□□□ -1.37
AP3S2P59780 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
AP3S2P59780 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AP3S2P59780 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
AP3S2P59780 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.51□□□□□ -1.37
AP3S2P59780 PSMC1P12-201ENST00000436509 1314 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 AC016251.2-201ENST00000623393 3089 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 TRAF6P1-201ENST00000429404 1558 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 MT-TS1-201ENST00000387416 69 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 AL354794.2-201ENST00000424795 1248 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AC010099.2-201ENST00000443177 373 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC6.5□□□□□ -1.37
AP3S2P59780 RHEBP1-201ENST00000448647 556 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AL157714.1-201ENST00000448964 625 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 CEACAMP3-202ENST00000483806 638 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC6.5□□□□□ -1.37
AP3S2P59780 AC091980.1-201ENST00000524262 288 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC6.5□□□□□ -1.37
AP3S2P59780 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC6.5□□□□□ -1.37
AP3S2P59780 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
AP3S2P59780 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 AC005185.1-201ENST00000604248 787 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 AL136985.2-201ENST00000607372 535 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AP3S2P59780 TRIM64EP-201ENST00000531233 1307 ntBASIC6.5□□□□□ -1.37
AP3S2P59780 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
AP3S2P59780 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
AP3S2P59780 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.49□□□□□ -1.37
AP3S2P59780 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.49□□□□□ -1.37
AP3S2P59780 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.49□□□□□ -1.37
AP3S2P59780 RN7SKP45-201ENST00000363509 304 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.49□□□□□ -1.37
AP3S2P59780 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 MIR623-201ENST00000384986 98 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.49□□□□□ -1.37
AP3S2P59780 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC6.49□□□□□ -1.37
AP3S2P59780 RPL36P18-201ENST00000419316 318 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 AL161454.1-201ENST00000446226 569 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.49□□□□□ -1.37
AP3S2P59780 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
AP3S2P59780 RN7SL420P-201ENST00000463843 298 ntBASIC6.49□□□□□ -1.37
AP3S2P59780 PRSS1-204ENST00000486171 803 ntTSL 5 BASIC6.49□□□□□ -1.37
AP3S2P59780 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC6.49□□□□□ -1.37
AP3S2P59780 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms