Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.82□□□□□ -1
POLR2AP24928 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.82□□□□□ -1
POLR2AP24928 AC234771.4-201ENST00000441416 730 ntBASIC8.82□□□□□ -1
POLR2AP24928 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 RN7SL372P-201ENST00000461982 298 ntBASIC8.82□□□□□ -1
POLR2AP24928 RN7SL332P-201ENST00000482163 254 ntBASIC8.82□□□□□ -1
POLR2AP24928 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.82□□□□□ -1
POLR2AP24928 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.82□□□□□ -1
POLR2AP24928 WDR45BP1-201ENST00000583470 1029 ntBASIC8.82□□□□□ -1
POLR2AP24928 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.82□□□□□ -1
POLR2AP24928 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 AC127502.2-201ENST00000602663 2351 ntBASIC8.82□□□□□ -1
POLR2AP24928 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 AC016831.3-201ENST00000446451 1723 ntBASIC8.82□□□□□ -1
POLR2AP24928 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 AL079341.1-201ENST00000404701 1207 ntBASIC8.82□□□□□ -1
POLR2AP24928 MYO5BP3-201ENST00000431872 1279 ntBASIC8.82□□□□□ -1
POLR2AP24928 AC010086.1-201ENST00000437359 1052 ntBASIC8.82□□□□□ -1
POLR2AP24928 AC144530.1-201ENST00000452862 555 ntBASIC8.82□□□□□ -1
POLR2AP24928 RPSAP48-201ENST00000466509 889 ntBASIC8.82□□□□□ -1
POLR2AP24928 RN7SL868P-201ENST00000485915 303 ntBASIC8.82□□□□□ -1
POLR2AP24928 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.82□□□□□ -1
POLR2AP24928 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
POLR2AP24928 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 MIR4312-201ENST00000579909 76 ntBASIC8.82□□□□□ -1
POLR2AP24928 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 MIR1910-201ENST00000636955 80 ntBASIC8.82□□□□□ -1
POLR2AP24928 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.82□□□□□ -1
POLR2AP24928 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 AC013391.3-201ENST00000567484 1456 ntBASIC8.82□□□□□ -1
POLR2AP24928 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
POLR2AP24928 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.82□□□□□ -1
POLR2AP24928 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
POLR2AP24928 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 AL591543.1-202ENST00000642095 4149 ntBASIC8.81□□□□□ -1
POLR2AP24928 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 UVSSA-201ENST00000324803 4441 ntBASIC8.81□□□□□ -1
POLR2AP24928 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 AL031123.2-201ENST00000563225 3325 ntBASIC8.81□□□□□ -1
POLR2AP24928 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 RPL5P27-201ENST00000437011 881 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.81□□□□□ -1
POLR2AP24928 SS18L2P1-201ENST00000445923 213 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.81□□□□□ -1
POLR2AP24928 RN7SL502P-201ENST00000481857 290 ntBASIC8.81□□□□□ -1
POLR2AP24928 UGT2B29P-201ENST00000509021 973 ntBASIC8.81□□□□□ -1
POLR2AP24928 OR4C49P-201ENST00000563891 900 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.81□□□□□ -1
POLR2AP24928 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.81□□□□□ -1
POLR2AP24928 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 AC012513.3-201ENST00000623250 2116 ntBASIC8.81□□□□□ -1
POLR2AP24928 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.81□□□□□ -1
POLR2AP24928 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
POLR2AP24928 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.81□□□□□ -1
POLR2AP24928 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 HERC2P2-201ENST00000613386 5181 ntBASIC8.81□□□□□ -1
POLR2AP24928 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms