Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TAP2-204ENST00000485701 274 ntTSL 311.71□□□□□ -0.542e-7■■□□□ 12.6
PRPF8Q6P2Q9 PYGB-202ENST00000428458 734 ntTSL 310.02□□□□□ -0.83e-7■■□□□ 12.6
PRPF8Q6P2Q9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.71□□□□□ -1.664e-6■■□□□ 12.6
PRPF8Q6P2Q9 GIGYF1-204ENST00000472105 500 ntTSL 315.8■□□□□ 0.122e-6■■□□□ 12.6
PRPF8Q6P2Q9 BSCL2-208ENST00000412351 491 ntTSL 35.04□□□□□ -1.61e-7■■□□□ 12.6
PRPF8Q6P2Q9 BSCL2-224ENST00000532115 328 ntTSL 32.72□□□□□ -1.971e-7■■□□□ 12.6
PRPF8Q6P2Q9 RBBP6-210ENST00000568015 695 ntTSL 313.53□□□□□ -0.243e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.592e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.972e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.162e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZFP30-207ENST00000587809 572 ntTSL 37.46□□□□□ -1.212e-6■■□□□ 12.6
PRPF8Q6P2Q9 RBBP6-209ENST00000567686 1138 ntTSL 54.32□□□□□ -1.721e-7■■□□□ 12.6
PRPF8Q6P2Q9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.743e-8■■□□□ 12.6
PRPF8Q6P2Q9 DVL3-206ENST00000467873 617 ntTSL 316.25■□□□□ 0.197e-10■■□□□ 12.6
PRPF8Q6P2Q9 BAIAP2-230ENST00000577097 1014 ntTSL 315.72■□□□□ 0.112e-7■■□□□ 12.6
PRPF8Q6P2Q9 BAIAP2-214ENST00000573677 646 ntTSL 411.24□□□□□ -0.612e-7■■□□□ 12.6
PRPF8Q6P2Q9 BAIAP2-218ENST00000574804 631 ntTSL 311.24□□□□□ -0.612e-7■■□□□ 12.6
PRPF8Q6P2Q9 BAIAP2-226ENST00000576364 542 ntTSL 510.02□□□□□ -0.82e-7■■□□□ 12.6
PRPF8Q6P2Q9 FN3K-204ENST00000573841 513 ntTSL 216.63■□□□□ 0.251e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC39A14-205ENST00000517370 839 ntTSL 311.24□□□□□ -0.612e-7■■□□□ 12.6
PRPF8Q6P2Q9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.52□□□□□ -0.243e-11■■□□□ 12.6
PRPF8Q6P2Q9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.69□□□□□ -0.061e-6■■□□□ 12.6
PRPF8Q6P2Q9 MROH1-203ENST00000525287 2065 ntTSL 212.73□□□□□ -0.371e-6■■□□□ 12.6
PRPF8Q6P2Q9 LUC7L3-211ENST00000507503 561 ntTSL 21.95□□□□□ -2.13e-8■■□□□ 12.6
PRPF8Q6P2Q9 PPM1H-205ENST00000551519 584 ntTSL 46.52□□□□□ -1.372e-7■■□□□ 12.6
PRPF8Q6P2Q9 PDIA3-203ENST00000446523 596 ntTSL 212.94□□□□□ -0.346e-9■■□□□ 12.6
PRPF8Q6P2Q9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.443e-9■■□□□ 12.6
PRPF8Q6P2Q9 C7orf43-209ENST00000472061 356 ntTSL 313.2□□□□□ -0.34e-7■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.146e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.57■□□□□ 0.086e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.056e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.136e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.26e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-212ENST00000474833 921 ntTSL 513.29□□□□□ -0.286e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.02□□□□□ -0.336e-8■■□□□ 12.5
PRPF8Q6P2Q9 IGSF8-204ENST00000460351 876 ntTSL 212.9□□□□□ -0.346e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-217ENST00000484181 1683 ntTSL 312.76□□□□□ -0.376e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.466e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12□□□□□ -0.496e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-214ENST00000478469 4502 ntTSL 1 (best) BASIC10.31□□□□□ -0.766e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-211ENST00000473073 1964 ntTSL 210.14□□□□□ -0.796e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.826e-8■■□□□ 12.5
PRPF8Q6P2Q9 PCCB-213ENST00000475214 1295 ntTSL 28.01□□□□□ -1.136e-8■■□□□ 12.5
PRPF8Q6P2Q9 NDEL1-212ENST00000582277 749 ntTSL 32.42□□□□□ -2.026e-8■■□□□ 12.5
PRPF8Q6P2Q9 DDX19A-206ENST00000562649 557 ntTSL 512.5□□□□□ -0.411e-6■■□□□ 12.5
PRPF8Q6P2Q9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.371e-7■■□□□ 12.5
PRPF8Q6P2Q9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.69□□□□□ -0.381e-7■■□□□ 12.5
PRPF8Q6P2Q9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.12□□□□□ -0.471e-7■■□□□ 12.5
PRPF8Q6P2Q9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.11■□□□□ 0.018e-9■■□□□ 12.5
PRPF8Q6P2Q9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.128e-9■■□□□ 12.5
PRPF8Q6P2Q9 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)10.97□□□□□ -0.658e-9■■□□□ 12.5
PRPF8Q6P2Q9 STXBP2-210ENST00000595950 552 ntTSL 519.12■□□□□ 0.653e-7■■□□□ 12.5
PRPF8Q6P2Q9 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.744e-6■■□□□ 12.5
PRPF8Q6P2Q9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.06■■□□□ 1.283e-7■■□□□ 12.5
PRPF8Q6P2Q9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.14□□□□□ -0.313e-7■■□□□ 12.5
PRPF8Q6P2Q9 ILVBL-205ENST00000531635 947 ntTSL 316.28■□□□□ 0.23e-6■■□□□ 12.5
PRPF8Q6P2Q9 ILVBL-207ENST00000533148 1309 ntTSL 514.71□□□□□ -0.053e-6■■□□□ 12.5
PRPF8Q6P2Q9 ILVBL-212ENST00000598709 747 ntTSL 513.01□□□□□ -0.333e-6■■□□□ 12.5
PRPF8Q6P2Q9 TF-202ENST00000414694 546 ntTSL 415.73■□□□□ 0.119e-18■■□□□ 12.5
PRPF8Q6P2Q9 TF-203ENST00000460531 577 ntTSL 415.73■□□□□ 0.119e-18■■□□□ 12.5
PRPF8Q6P2Q9 TF-213ENST00000494430 594 ntTSL 415.73■□□□□ 0.119e-18■■□□□ 12.5
PRPF8Q6P2Q9 TF-208ENST00000474287 645 ntTSL 215.01□□□□□ -0.019e-18■■□□□ 12.5
PRPF8Q6P2Q9 TF-206ENST00000466911 526 ntTSL 413.58□□□□□ -0.239e-18■■□□□ 12.5
PRPF8Q6P2Q9 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.15□□□□□ -1.439e-18■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-204ENST00000493935 763 ntTSL 410.61□□□□□ -0.712e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-207ENST00000613043 574 ntTSL 510.61□□□□□ -0.712e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.752e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC9.3□□□□□ -0.922e-10■■□□□ 12.5
PRPF8Q6P2Q9 CFB-284ENST00000498317 589 ntTSL 27.27□□□□□ -1.252e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.352e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.352e-10■■□□□ 12.5
PRPF8Q6P2Q9 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC6.56□□□□□ -1.362e-10■■□□□ 12.5
PRPF8Q6P2Q9 C21orf59-207ENST00000458138 863 ntTSL 315.04■□□□□ -04e-9■■□□□ 12.5
PRPF8Q6P2Q9 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.674e-6■■□□□ 12.5
PRPF8Q6P2Q9 SPAG5-203ENST00000536674 870 ntTSL 39.54□□□□□ -0.882e-6■■□□□ 12.5
PRPF8Q6P2Q9 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.254e-6■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.485e-7■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.86■□□□□ 0.455e-7■■□□□ 12.5
PRPF8Q6P2Q9 SLC12A7-205ENST00000514994 586 ntTSL 314.89□□□□□ -0.034e-7■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.84□□□□□ -0.035e-7■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-204ENST00000564445 864 ntTSL 313.26□□□□□ -0.295e-7■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.375e-7■■□□□ 12.5
PRPF8Q6P2Q9 EPS8L2-214ENST00000529680 551 ntTSL 412.85□□□□□ -0.351e-19■■□□□ 12.5
PRPF8Q6P2Q9 ZNF564-204ENST00000465410 514 ntTSL 513.31□□□□□ -0.284e-8■■□□□ 12.5
PRPF8Q6P2Q9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.81□□□□□ -0.364e-8■■□□□ 12.5
PRPF8Q6P2Q9 BRD9-219ENST00000523139 580 ntTSL 35.18□□□□□ -1.582e-7■■□□□ 12.5
PRPF8Q6P2Q9 CDK10-218ENST00000565470 724 ntTSL 315.63■□□□□ 0.092e-8■■□□□ 12.5
PRPF8Q6P2Q9 MIR93-201ENST00000385024 80 ntBASIC2.67□□□□□ -1.984e-8■■□□□ 12.5
PRPF8Q6P2Q9 CMIP-210ENST00000569146 1589 ntTSL 511.55□□□□□ -0.568e-7■■□□□ 12.5
PRPF8Q6P2Q9 DDX3Y-203ENST00000440554 792 ntTSL 34.35□□□□□ -1.711e-6■■□□□ 12.5
PRPF8Q6P2Q9 NACA-219ENST00000551793 768 ntTSL 25.52□□□□□ -1.534e-16■■□□□ 12.5
PRPF8Q6P2Q9 RASSF4-202ENST00000427758 528 ntTSL 312.49□□□□□ -0.411e-7■■□□□ 12.5
PRPF8Q6P2Q9 SDCCAG3-211ENST00000486441 570 ntTSL 512.85□□□□□ -0.351e-6■■□□□ 12.5
PRPF8Q6P2Q9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.991e-7■■□□□ 12.5
PRPF8Q6P2Q9 RELA-224ENST00000534305 666 ntTSL 315.08■□□□□ 01e-7■■□□□ 12.5
PRPF8Q6P2Q9 RELA-218ENST00000532776 602 ntTSL 214.02□□□□□ -0.171e-7■■□□□ 12.5
PRPF8Q6P2Q9 RELA-206ENST00000525858 754 ntTSL 211.59□□□□□ -0.551e-7■■□□□ 12.5
PRPF8Q6P2Q9 KANSL3-217ENST00000484020 438 ntTSL 211.49□□□□□ -0.573e-8■■□□□ 12.5
PRPF8Q6P2Q9 PPT2-252ENST00000465047 238 ntTSL 310.36□□□□□ -0.755e-9■■□□□ 12.5
Retrieved 100 of 73,762 protein–RNA pairs in 466.7 ms