RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
NDEL1-212ENST00000582277 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
NDEL1-212ENST00000582277 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
NDEL1-212ENST00000582277 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
NDEL1-212ENST00000582277 FOXD1Q16676 465 aa15.08■□□□□ 0
NDEL1-212ENST00000582277 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
NDEL1-212ENST00000582277 ADRA2BP18089 450 aa14.46□□□□□ -0.09
NDEL1-212ENST00000582277 PPP6R1Q9UPN7 881 aa14.45□□□□□ -0.1
NDEL1-212ENST00000582277 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
NDEL1-212ENST00000582277 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
NDEL1-212ENST00000582277 MSH5O43196 834 aa13.99□□□□□ -0.17
NDEL1-212ENST00000582277 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
NDEL1-212ENST00000582277 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
NDEL1-212ENST00000582277 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
NDEL1-212ENST00000582277 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
NDEL1-212ENST00000582277 KCNA4P22459 653 aa12.76□□□□□ -0.37
NDEL1-212ENST00000582277 CNKSR2Q8WXI2 1034 aa12.75□□□□□ -0.37
NDEL1-212ENST00000582277 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
NDEL1-212ENST00000582277 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
NDEL1-212ENST00000582277 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
NDEL1-212ENST00000582277 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
NDEL1-212ENST00000582277 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-212ENST00000582277 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
NDEL1-212ENST00000582277 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
NDEL1-212ENST00000582277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■□□□□ 9.7
NDEL1-212ENST00000582277 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
NDEL1-212ENST00000582277 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
NDEL1-212ENST00000582277 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
NDEL1-212ENST00000582277 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
NDEL1-212ENST00000582277 ZBTB22O15209 634 aa11.73□□□□□ -0.53
NDEL1-212ENST00000582277 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
NDEL1-212ENST00000582277 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
NDEL1-212ENST00000582277 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
NDEL1-212ENST00000582277 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
NDEL1-212ENST00000582277 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
NDEL1-212ENST00000582277 CAPN15O75808 1086 aa11.55□□□□□ -0.56
NDEL1-212ENST00000582277 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
NDEL1-212ENST00000582277 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
NDEL1-212ENST00000582277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
NDEL1-212ENST00000582277 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
NDEL1-212ENST00000582277 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
NDEL1-212ENST00000582277 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
NDEL1-212ENST00000582277 ABCB7O75027 752 aa11.37□□□□□ -0.59
NDEL1-212ENST00000582277 APLP2Q06481 763 aa11.37□□□□□ -0.59
NDEL1-212ENST00000582277 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-212ENST00000582277 DSG3P32926 999 aa11.29□□□□□ -0.6
NDEL1-212ENST00000582277 POLA2Q14181 598 aa11.21□□□□□ -0.61
NDEL1-212ENST00000582277 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
NDEL1-212ENST00000582277 POTEHQ6S545 545 aa11.15□□□□□ -0.62
NDEL1-212ENST00000582277 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
NDEL1-212ENST00000582277 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
NDEL1-212ENST00000582277 FBLN2P98095 1184 aa10.85□□□□□ -0.67
NDEL1-212ENST00000582277 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
NDEL1-212ENST00000582277 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
NDEL1-212ENST00000582277 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
NDEL1-212ENST00000582277 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
NDEL1-212ENST00000582277 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
NDEL1-212ENST00000582277 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
NDEL1-212ENST00000582277 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
NDEL1-212ENST00000582277 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
NDEL1-212ENST00000582277 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
NDEL1-212ENST00000582277 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-212ENST00000582277 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
NDEL1-212ENST00000582277 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
NDEL1-212ENST00000582277 FKBP8Q14318 412 aa10.48□□□□□ -0.73
NDEL1-212ENST00000582277 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
NDEL1-212ENST00000582277 CLEC11AQ9Y240 323 aa10.46□□□□□ -0.73
NDEL1-212ENST00000582277 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
NDEL1-212ENST00000582277 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
NDEL1-212ENST00000582277 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
NDEL1-212ENST00000582277 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
NDEL1-212ENST00000582277 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
NDEL1-212ENST00000582277 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
NDEL1-212ENST00000582277 PROM2Q8N271 834 aa10.2□□□□□ -0.78
NDEL1-212ENST00000582277 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
NDEL1-212ENST00000582277 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
NDEL1-212ENST00000582277 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
NDEL1-212ENST00000582277 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
NDEL1-212ENST00000582277 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
NDEL1-212ENST00000582277 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
NDEL1-212ENST00000582277 HAX1O00165 279 aa10.07□□□□□ -0.8
NDEL1-212ENST00000582277 MIER1Q8N108 512 aa10.06□□□□□ -0.8
NDEL1-212ENST00000582277 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
NDEL1-212ENST00000582277 FBXO3Q9UK99 471 aa10□□□□□ -0.81
NDEL1-212ENST00000582277 FARP1Q9Y4F1 1045 aaPredicted RBP10□□□□□ -0.81
NDEL1-212ENST00000582277 EVX2Q03828 476 aa9.98□□□□□ -0.81
NDEL1-212ENST00000582277 VASPP50552 380 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-212ENST00000582277 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
NDEL1-212ENST00000582277 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
NDEL1-212ENST00000582277 KLHL34Q8N239 644 aa9.9□□□□□ -0.82
NDEL1-212ENST00000582277 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
NDEL1-212ENST00000582277 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
NDEL1-212ENST00000582277 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
NDEL1-212ENST00000582277 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-212ENST00000582277 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
NDEL1-212ENST00000582277 ZRANB1Q9UGI0 708 aa9.82□□□□□ -0.84
NDEL1-212ENST00000582277 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
NDEL1-212ENST00000582277 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
NDEL1-212ENST00000582277 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
NDEL1-212ENST00000582277 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms