Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.53□□□□□ -1.04
UBE4BO95155 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
UBE4BO95155 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
UBE4BO95155 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
UBE4BO95155 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
UBE4BO95155 PKMP3-201ENST00000405497 715 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.53□□□□□ -1.04
UBE4BO95155 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.53□□□□□ -1.04
UBE4BO95155 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 AL161454.1-201ENST00000446226 569 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AC026254.1-201ENST00000479473 431 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 SLC25A14P1-201ENST00000502867 901 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC8.53□□□□□ -1.04
UBE4BO95155 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC8.53□□□□□ -1.04
UBE4BO95155 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.53□□□□□ -1.04
UBE4BO95155 AP005597.1-201ENST00000534192 802 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.53□□□□□ -1.04
UBE4BO95155 SRMP2-201ENST00000553832 916 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.53□□□□□ -1.04
UBE4BO95155 MRPL45P2-203ENST00000573318 473 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.53□□□□□ -1.04
UBE4BO95155 uc_338.33-201ENST00000614988 170 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 AC007224.2-201ENST00000625011 510 ntBASIC8.53□□□□□ -1.04
UBE4BO95155 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
UBE4BO95155 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.04
UBE4BO95155 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
UBE4BO95155 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.52□□□□□ -1.05
UBE4BO95155 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.52□□□□□ -1.05
UBE4BO95155 PHF2P2-202ENST00000444553 2865 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
UBE4BO95155 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
UBE4BO95155 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.52□□□□□ -1.05
UBE4BO95155 AL080317.3-201ENST00000607434 4315 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 AC133644.1-201ENST00000398171 937 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 TERF1P4-201ENST00000399580 1115 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 RPSAP42-201ENST00000403415 878 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.52□□□□□ -1.05
UBE4BO95155 OR10U1P-201ENST00000414690 905 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 AC092042.2-201ENST00000417304 331 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 AC011753.4-201ENST00000417974 311 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.52□□□□□ -1.05
UBE4BO95155 HMGN2P24-201ENST00000433516 273 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 AC123904.1-201ENST00000441072 368 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.52□□□□□ -1.05
UBE4BO95155 AC087385.2-201ENST00000477729 498 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 RN7SL89P-201ENST00000480252 283 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 FTH1P23-201ENST00000492727 550 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 NMNAT1P4-201ENST00000505598 840 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.52□□□□□ -1.05
UBE4BO95155 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.52□□□□□ -1.05
UBE4BO95155 OR11J5P-201ENST00000556889 934 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.52□□□□□ -1.05
UBE4BO95155 RN7SL376P-201ENST00000578594 264 ntBASIC8.52□□□□□ -1.05
UBE4BO95155 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.52□□□□□ -1.05
UBE4BO95155 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
UBE4BO95155 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms