Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
FOXG1P55316 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXG1P55316 AC005790.1-201ENST00000619774 450 ntBASIC6.9□□□□□ -1.3
FOXG1P55316 MIR6807-201ENST00000621968 92 ntBASIC6.9□□□□□ -1.3
FOXG1P55316 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXG1P55316 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXG1P55316 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXG1P55316 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXG1P55316 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.9□□□□□ -1.31
FOXG1P55316 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC6.9□□□□□ -1.31
FOXG1P55316 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
FOXG1P55316 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.9□□□□□ -1.31
FOXG1P55316 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC6.9□□□□□ -1.31
FOXG1P55316 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
FOXG1P55316 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
FOXG1P55316 AC092999.1-201ENST00000624004 1924 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 H2AFZP3-201ENST00000394213 387 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC130472.1-201ENST00000427885 309 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 PYHIN5P-201ENST00000431627 723 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC097527.1-201ENST00000437031 530 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.89□□□□□ -1.31
FOXG1P55316 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 YAP1P2-201ENST00000455104 610 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 IGLVIV-59-201ENST00000520218 250 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXG1P55316 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC136944.5-201ENST00000573021 151 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 RN7SL25P-201ENST00000583862 260 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 AL021807.1-201ENST00000607175 565 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXG1P55316 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
FOXG1P55316 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 AC020904.2-202ENST00000614660 1401 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 CDYLP1-201ENST00000419017 1458 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 AC124045.1-201ENST00000606008 1953 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 NBPF25P-201ENST00000606775 2019 ntBASIC6.89□□□□□ -1.31
FOXG1P55316 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
FOXG1P55316 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
FOXG1P55316 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXG1P55316 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
FOXG1P55316 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXG1P55316 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXG1P55316 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms