Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 AL138781.2-201ENST00000617896 1843 ntBASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COMMD3-BMI1R4GMX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3-BMI1R4GMX3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3-BMI1R4GMX3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 MIR4767-201ENST00000582827 78 ntBASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COMMD3-BMI1R4GMX3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3-BMI1R4GMX3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms