Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 PNMA6B-201ENST00000538162 1200 ntBASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC5Q9Y5F6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 Z99916.2-201ENST00000604037 246 ntBASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC5Q9Y5F6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 ECEL1P3-201ENST00000427961 737 ntBASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC5Q9Y5F6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC5Q9Y5F6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC5Q9Y5F6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PCDHGC5Q9Y5F6 AC092368.3-202ENST00000574180 1591 ntBASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
PCDHGC5Q9Y5F6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AC245052.3-201ENST00000450182 901 ntBASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AL589743.5-201ENST00000616611 1050 ntBASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 AC100791.3-201ENST00000617619 330 ntBASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC5Q9Y5F6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC5Q9Y5F6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms