Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MTCL1Q9Y4B5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 AC116562.2-201ENST00000507042 360 ntBASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 KRT16P1-201ENST00000399124 1418 ntBASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.1■□□□□ 0.97
MTCL1Q9Y4B5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 AL024507.2-201ENST00000606070 2574 ntBASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 HTR7P1-201ENST00000538670 1336 ntBASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 UNC93B2-201ENST00000285383 730 ntBASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.09■□□□□ 0.97
MTCL1Q9Y4B5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MTCL1Q9Y4B5 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 NIFKP9-201ENST00000419265 221 ntBASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MTCL1Q9Y4B5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 AL031963.3-201ENST00000606441 850 ntBASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MTCL1Q9Y4B5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 AL390955.1-201ENST00000428694 934 ntBASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 AL445228.2-201ENST00000605589 952 ntBASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 AC004264.1-201ENST00000608354 794 ntBASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.06■□□□□ 0.96
MTCL1Q9Y4B5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms