Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KRT17P2-201ENST00000300992 1314 ntBASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
SHANK2Q9UPX8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 NBPF21P-201ENST00000425093 1451 ntBASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 AL353708.3-201ENST00000610272 989 ntBASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 AC133561.5-201ENST00000635547 218 ntBASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 AC097493.4-201ENST00000641197 219 ntBASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.23■■■□□ 2.43
SHANK2Q9UPX8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 FEM1AP4-201ENST00000443167 1987 ntBASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 AC121338.2-201ENST00000622535 1744 ntBASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 AC087499.1-201ENST00000418141 1075 ntBASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SHANK2Q9UPX8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC30.21■■■□□ 2.43
SHANK2Q9UPX8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 TSPY15P-201ENST00000457163 923 ntBASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
SHANK2Q9UPX8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SHANK2Q9UPX8 EP400NL-214ENST00000641289 2402 ntBASIC30.2■■■□□ 2.42
SHANK2Q9UPX8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SHANK2Q9UPX8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SHANK2Q9UPX8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
SHANK2Q9UPX8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 KRT18P35-201ENST00000510488 1269 ntBASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 HTR7P1-201ENST00000538670 1336 ntBASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 AC026471.5-201ENST00000615068 467 ntBASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SHANK2Q9UPX8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SHANK2Q9UPX8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC30.18■■■□□ 2.42
SHANK2Q9UPX8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC30.18■■■□□ 2.42
SHANK2Q9UPX8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.18■■■□□ 2.42
SHANK2Q9UPX8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHANK2Q9UPX8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms