Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC245100.3-201ENST00000441281 285 ntBASIC8.38□□□□□ -1.07
MACF1Q9UPN3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 AC007663.1-201ENST00000438948 1240 ntBASIC8.38□□□□□ -1.07
MACF1Q9UPN3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 HIST1H2APS4-201ENST00000362070 348 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AL590627.1-203ENST00000421194 1026 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AC064862.7-201ENST00000604520 867 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 FOSL1P1-201ENST00000511041 816 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 MIR3180-1-201ENST00000580374 94 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 MIR3180-3-201ENST00000584616 94 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 AL121912.1-201ENST00000603683 238 ntBASIC8.37□□□□□ -1.07
MACF1Q9UPN3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC8.37□□□□□ -1.07
MACF1Q9UPN3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 MIR1199-201ENST00000621445 119 ntBASIC8.36□□□□□ -1.07
MACF1Q9UPN3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 AC097488.1-201ENST00000507834 756 ntBASIC8.36□□□□□ -1.07
MACF1Q9UPN3 PGAM5P1-201ENST00000518923 814 ntBASIC8.36□□□□□ -1.07
MACF1Q9UPN3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 AL121829.2-201ENST00000620908 328 ntBASIC8.36□□□□□ -1.07
MACF1Q9UPN3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC8.36□□□□□ -1.07
MACF1Q9UPN3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms