Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHA4Q9UN74 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA4Q9UN74 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA4Q9UN74 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA4Q9UN74 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA4Q9UN74 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHA4Q9UN74 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 AC023632.3-201ENST00000521633 145 ntBASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA4Q9UN74 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHA4Q9UN74 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 KRT8P17-201ENST00000453110 1448 ntBASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 AL031963.3-201ENST00000606441 850 ntBASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms