Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD9Q9P000 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COMMD9Q9P000 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD9Q9P000 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COMMD9Q9P000 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.14■□□□□ 0.34
COMMD9Q9P000 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COMMD9Q9P000 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
COMMD9Q9P000 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
COMMD9Q9P000 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COMMD9Q9P000 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COMMD9Q9P000 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
COMMD9Q9P000 AC026471.1-201ENST00000564629 3026 ntBASIC17.12■□□□□ 0.33
COMMD9Q9P000 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COMMD9Q9P000 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 AC131281.2-201ENST00000520478 145 ntBASIC17.11■□□□□ 0.33
COMMD9Q9P000 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 FP700111.2-201ENST00000619190 1892 ntBASIC17.11■□□□□ 0.33
COMMD9Q9P000 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
COMMD9Q9P000 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms