Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 AC027702.1-201ENST00000563810 1770 ntBASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 AC007225.1-201ENST00000566331 1836 ntBASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.69■□□□□ 0.58
CHCHD3Q9NX63 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 MIR3181-201ENST00000578512 73 ntBASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.68■□□□□ 0.58
CHCHD3Q9NX63 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 AC239859.2-201ENST00000444165 318 ntBASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 AP006587.3-201ENST00000525742 1516 ntBASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHCHD3Q9NX63 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHCHD3Q9NX63 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 TNRC18P3-201ENST00000441896 2691 ntBASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 AC092171.4-201ENST00000609130 632 ntBASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHCHD3Q9NX63 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CHCHD3Q9NX63 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CHCHD3Q9NX63 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
CHCHD3Q9NX63 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHCHD3Q9NX63 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHCHD3Q9NX63 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms