Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AC098934.4-201ENST00000564127 592 ntBASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AL138781.1-201ENST00000566567 1274 ntBASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AC104771.1-201ENST00000603335 964 ntBASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AC092118.2-201ENST00000613495 667 ntBASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 TCF3P1-201ENST00000423021 1937 ntBASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 BX119927.1-201ENST00000636596 1552 ntBASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 AL109923.1-201ENST00000618799 583 ntBASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BLOC1S4Q9NUP1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 SLC29A4P1-201ENST00000398760 971 ntBASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 DUSP5P2-201ENST00000426873 1033 ntBASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 PCDHAC2-203ENST00000615316 3011 ntBASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
BLOC1S4Q9NUP1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.45■■□□□ 1.19
BLOC1S4Q9NUP1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 AC091874.3-201ENST00000512672 1195 ntBASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.45■■□□□ 1.18
BLOC1S4Q9NUP1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms