Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2LQ9NUG4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.14■□□□□ 0.65
CCM2LQ9NUG4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2LQ9NUG4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.14■□□□□ 0.65
CCM2LQ9NUG4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2LQ9NUG4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.12■□□□□ 0.65
CCM2LQ9NUG4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCM2LQ9NUG4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 AC016769.1-201ENST00000409132 1010 ntBASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCM2LQ9NUG4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 AP004607.4-201ENST00000530158 1459 ntBASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCM2LQ9NUG4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms