Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 FAM21FP-204ENST00000608637 956 ntBASIC20.01■□□□□ 0.79
SSU72Q9NP77 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.01■□□□□ 0.79
SSU72Q9NP77 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSU72Q9NP77 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.01■□□□□ 0.79
SSU72Q9NP77 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20■□□□□ 0.79
SSU72Q9NP77 PWWP2AP1-201ENST00000429776 2273 ntBASIC20■□□□□ 0.79
SSU72Q9NP77 RASA4CP-201ENST00000424092 1398 ntBASIC20■□□□□ 0.79
SSU72Q9NP77 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20■□□□□ 0.79
SSU72Q9NP77 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SSU72Q9NP77 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SSU72Q9NP77 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20■□□□□ 0.79
SSU72Q9NP77 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SSU72Q9NP77 AC243732.1-201ENST00000612648 864 ntBASIC20■□□□□ 0.79
SSU72Q9NP77 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20■□□□□ 0.79
SSU72Q9NP77 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20■□□□□ 0.79
SSU72Q9NP77 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20■□□□□ 0.79
SSU72Q9NP77 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSU72Q9NP77 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSU72Q9NP77 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20■□□□□ 0.79
SSU72Q9NP77 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSU72Q9NP77 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
SSU72Q9NP77 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.99■□□□□ 0.79
SSU72Q9NP77 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.99■□□□□ 0.79
SSU72Q9NP77 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
SSU72Q9NP77 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 AC091799.1-201ENST00000422823 811 ntBASIC19.99■□□□□ 0.79
SSU72Q9NP77 AC007322.3-201ENST00000426526 701 ntBASIC19.99■□□□□ 0.79
SSU72Q9NP77 AP001330.3-201ENST00000520123 633 ntBASIC19.99■□□□□ 0.79
SSU72Q9NP77 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.99■□□□□ 0.79
SSU72Q9NP77 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSU72Q9NP77 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 AC093503.3-201ENST00000624917 2352 ntBASIC19.98■□□□□ 0.79
SSU72Q9NP77 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.98■□□□□ 0.79
SSU72Q9NP77 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.98■□□□□ 0.79
SSU72Q9NP77 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSU72Q9NP77 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SSU72Q9NP77 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 EDA-201ENST00000338901 1233 ntBASIC19.97■□□□□ 0.79
SSU72Q9NP77 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms