Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC68Q9H2F9 AL512408.1-201ENST00000569378 2000 ntBASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC68Q9H2F9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.14■□□□□ 0.82
CCDC68Q9H2F9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 AC087633.2-202ENST00000565166 1439 ntBASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 DUX4L16-201ENST00000555130 1264 ntBASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC68Q9H2F9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms