Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 FITM1-202ENST00000559294 800 ntBASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBE2OQ9C0C9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 ATP5G1P1-201ENST00000448724 379 ntBASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 AC010203.1-204ENST00000548782 407 ntBASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.27■■□□□ 1.16
UBE2OQ9C0C9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
UBE2OQ9C0C9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 AC006011.2-201ENST00000621313 1158 ntBASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 NBPF21P-201ENST00000425093 1451 ntBASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.26■■□□□ 1.15
UBE2OQ9C0C9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 AC026396.1-201ENST00000419388 421 ntBASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 GUSBP5-202ENST00000510805 1989 ntBASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBE2OQ9C0C9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 AP002982.1-201ENST00000492365 877 ntBASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 AL121829.2-201ENST00000620908 328 ntBASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
UBE2OQ9C0C9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
UBE2OQ9C0C9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms