Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CRNKL1Q9BZJ0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CRNKL1Q9BZJ0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CRNKL1Q9BZJ0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 C1QBPP2-201ENST00000528754 825 ntBASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 AL359736.2-201ENST00000621992 437 ntBASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CRNKL1Q9BZJ0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CRNKL1Q9BZJ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 RPPH1-201ENST00000516869 333 ntBASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.02■■□□□ 1.44
CRNKL1Q9BZJ0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 HLA-G-202ENST00000376815 851 ntBASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 HLA-G-203ENST00000376818 1127 ntBASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 MTDHP1-201ENST00000605323 784 ntBASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CRNKL1Q9BZJ0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 AC093827.2-201ENST00000512654 315 ntBASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 AL031963.3-201ENST00000606441 850 ntBASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CRNKL1Q9BZJ0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.99■■□□□ 1.43
CRNKL1Q9BZJ0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms