Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 NT5C3AP1-201ENST00000394500 1012 ntBASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 MIR939-201ENST00000401314 82 ntBASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 AC106739.1-201ENST00000617035 715 ntBASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 AL136967.2-201ENST00000623968 743 ntBASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.22□□□□□ -0.77
KRTAP3-1Q9BYR8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 Z82202.1-201ENST00000623446 1880 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AC093503.3-201ENST00000624917 2352 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 EDA-201ENST00000338901 1233 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AC091799.1-201ENST00000422823 811 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AC096631.2-201ENST00000436136 790 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AC010141.2-201ENST00000452426 721 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AC079140.4-201ENST00000507448 529 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 AL031432.3-201ENST00000607698 485 ntBASIC10.21□□□□□ -0.77
KRTAP3-1Q9BYR8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
KRTAP3-1Q9BYR8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms