Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSBP3Q9BWW4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 AC073130.3-201ENST00000624389 2278 ntBASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 AC006058.3-201ENST00000606217 1069 ntBASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PLK5-205ENST00000642079 1969 ntBASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSBP3Q9BWW4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 UNC93B4-201ENST00000505679 747 ntBASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 SOX15-203ENST00000570788 1093 ntBASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.79■□□□□ 0.28
SSBP3Q9BWW4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 AL390719.1-204ENST00000412397 1219 ntBASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSBP3Q9BWW4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSBP3Q9BWW4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms