Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCM2Q9BSQ5 DPP3P2-201ENST00000416030 1696 ntBASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 AC083880.1-201ENST00000608266 535 ntBASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCM2Q9BSQ5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.83■□□□□ 0.77
CCM2Q9BSQ5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCM2Q9BSQ5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 KRT18P6-201ENST00000555540 1265 ntBASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCM2Q9BSQ5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 AL157384.1-201ENST00000445995 2473 ntBASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.81■□□□□ 0.76
CCM2Q9BSQ5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.8■□□□□ 0.76
CCM2Q9BSQ5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms