Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC012414.1-201ENST00000556676 535 ntBASIC19.64■□□□□ 0.73
EBF4Q9BQW3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EBF4Q9BQW3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 KRT8P36-201ENST00000489121 1440 ntBASIC19.62■□□□□ 0.73
EBF4Q9BQW3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.62■□□□□ 0.73
EBF4Q9BQW3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.61■□□□□ 0.73
EBF4Q9BQW3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 AC093503.3-201ENST00000624917 2352 ntBASIC19.61■□□□□ 0.73
EBF4Q9BQW3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EBF4Q9BQW3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
EBF4Q9BQW3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 AP001330.3-201ENST00000520123 633 ntBASIC19.6■□□□□ 0.73
EBF4Q9BQW3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 AC138907.5-202ENST00000569484 235 ntBASIC19.6■□□□□ 0.73
EBF4Q9BQW3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.6■□□□□ 0.73
EBF4Q9BQW3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EBF4Q9BQW3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms