Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 AC010997.5-201ENST00000609182 354 ntBASIC13.43□□□□□ -0.26
LITAFQ99732 AC104581.1-202ENST00000635932 2618 ntBASIC13.43□□□□□ -0.26
LITAFQ99732 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.43□□□□□ -0.26
LITAFQ99732 PCDHB18P-201ENST00000524813 2368 ntBASIC13.43□□□□□ -0.26
LITAFQ99732 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.43□□□□□ -0.26
LITAFQ99732 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LITAFQ99732 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 AC135050.7-201ENST00000624508 2218 ntBASIC13.42□□□□□ -0.26
LITAFQ99732 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 TSPY13P-201ENST00000338964 914 ntBASIC13.42□□□□□ -0.26
LITAFQ99732 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.42□□□□□ -0.26
LITAFQ99732 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 SMUG1P1-201ENST00000590640 811 ntBASIC13.42□□□□□ -0.26
LITAFQ99732 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LITAFQ99732 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LITAFQ99732 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LITAFQ99732 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.42□□□□□ -0.26
LITAFQ99732 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LITAFQ99732 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LITAFQ99732 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.41□□□□□ -0.26
LITAFQ99732 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.41□□□□□ -0.26
LITAFQ99732 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.41□□□□□ -0.26
LITAFQ99732 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LITAFQ99732 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LITAFQ99732 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.41□□□□□ -0.26
LITAFQ99732 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LITAFQ99732 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.4□□□□□ -0.26
LITAFQ99732 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LITAFQ99732 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms